Unable to update

Bazzite
1

Hello, I’m a Bazzite HTPC user and update my distro infrequently. Bazzite seems to have an issue with python-jaraco in particular.

I do not know how to correct this and put the updates through. Please find the details below:

Full update text 
yan@bazzite:~$ ujust upgrade

── 14:37:35 - System update ────────────────────────────────────────────────────
Pulling manifest: ostree-image-signed:docker://ghcr.io/ublue-os/bazzite:stable
No upgrade available.

── 14:37:37 - Distrobox ────────────────────────────────────────────────────────
 Upgrading Google-Drive-access...
Starting container...                   	 [ OK ]
Installing basic packages...            	 [ OK ]
Setting up devpts mounts...             	 [ OK ]
Setting up read-only mounts...          	 [ OK ]
Setting up read-write mounts...         	 [ OK ]
Setting up host's sockets integration...	 [ OK ]
Integrating host's themes, icons, fonts...	 [ OK ]
Setting up package manager exceptions...	 [ OK ]
Setting up package manager hooks...     	 [ OK ]
Setting up pacman exceptions...         	 [ OK ]
Setting up pacman hooks...              	 [ OK ]
Setting up distrobox profile...         	 [ OK ]
Setting up sudo...                      	 [ OK ]
Setting up user groups...               	 [ OK ]
Setting up kerberos integration...      	 [ OK ]
Setting up user's group list...         	 [ OK ]
Setting up user home...                 	 [ OK ]
Ensuring user's access...               	 [ OK ]

Container Setup Complete!
distrobox: Installing basic packages...
/usr/bin/pacman
:: Synchronising package databases...
 core downloading...
 extra downloading...
 multilib downloading...
:: Starting full system upgrade...
resolving dependencies...
looking for conflicting packages...
warning: dependency cycle detected:
warning: pam will be installed before its systemd-libs dependency
warning: dependency cycle detected:
warning: libcamera-ipa will be installed before its libcamera dependency
warning: dependency cycle detected:
warning: plasma-workspace will be installed before its plasma-integration dependency

warning: insufficient columns available for table display
Packages (226) abseil-cpp-20240722.0-1  alsa-card-profiles-1:1.2.3-1  alsa-plugins-1:1.2.12-3  aom-3.10.0-1
               attica-6.5.0-1  audit-4.0.2-1  bash-5.2.032-2  binutils-2.43+r4+g7999dae6961-1  breeze-6.1.4-1
               breeze-icons-6.5.0-1  bubblewrap-0.10.0-1  ca-certificates-mozilla-3.103-1  cifs-utils-7.0-5
               cmake-3.30.3-1  curl-8.9.1-2  device-mapper-2.03.26-1  fakeroot-1.36-1  ffmpeg-2:7.0.2-1
               findutils-4.10.0-2  frameworkintegration-6.5.0-1  freetype2-2.13.3-1  gawk-5.3.0-2
               gcc-14.2.1+r32+geccf707e5ce-1  gcc-libs-14.2.1+r32+geccf707e5ce-1  git-2.46.0-2  glib2-2.80.5-1
               glibc-2.40+r16+gaa533d58ff-2  glibc-locales-2.40+r16+gaa533d58ff-2  gnome-desktop-1:44.1-1
               gnome-desktop-common-1:44.1-1  gnutls-3.8.7-1  groff-1.23.0-7  gst-plugins-bad-libs-1.24.7-1
               gst-plugins-base-libs-1.24.7-1  gstreamer-1.24.7-1  gtest-1.15.2-1
               gtk-update-icon-cache-1:4.14.5-1  gtk4-1:4.14.5-1  gtksourceview3-1:3.24.11+r28+g73e57b57-2
               hwdata-0.385-1  iana-etc-20240814-1  json-glib-1.10.0-1  kactivitymanagerd-6.1.4-1
               karchive-6.5.0-1  kauth-6.5.0-1  kbd-2.6.4-2  kbookmarks-6.5.0-1  kcmutils-6.5.0-1
               kcodecs-6.5.0-1  kcolorscheme-6.5.0-1  kcompletion-6.5.0-1  kconfig-6.5.0-1
               kconfigwidgets-6.5.0-1  kcoreaddons-6.5.0-1  kcrash-6.5.0-1  kdbusaddons-6.5.0-1
               kde-cli-tools-6.1.4-1  kdeclarative-6.5.0-1  kdecoration-6.1.4-1  kded-6.5.0-1  kdesu-6.5.0-1
               kdnssd-6.5.0-1  kglobalaccel-6.5.0-1  kglobalacceld-6.1.4-1  kguiaddons-6.5.0-1
               kholidays-1:6.5.0-1  ki18n-6.5.0-1  kiconthemes-6.5.0-1  kidletime-6.5.0-1  kio-6.5.0-1
               kio-extras-24.08.0-1  kirigami-6.5.0-1  kitemmodels-6.5.0-1  kitemviews-6.5.0-1
               kjobwidgets-6.5.0-1  kmod-33-3  knewstuff-6.5.0-1  knotifications-6.5.0-1
               knotifyconfig-6.5.0-1  kpackage-6.5.0-1  kparts-6.5.0-1  kpipewire-6.1.4-1  kpty-6.5.0-1
               kquickcharts-6.5.0-1  krunner-6.5.0-1  kscreenlocker-6.1.4-1  kservice-6.5.0-1
               kstatusnotifieritem-6.5.0-1  ksvg-6.5.0-1  ksystemstats-6.1.4-1  ktexteditor-6.5.0-1
               ktextwidgets-6.5.0-1  kuserfeedback-6.5.0-1  kwallet-6.5.0-1  kwayland-6.1.4-1
               kwidgetsaddons-6.5.0-1  kwin-6.1.4-1  kwindowsystem-6.5.0-1  kxmlgui-6.5.0-1
               layer-shell-qt-6.1.4-1  lib32-curl-8.9.1-1  lib32-freetype2-2.13.3-1
               lib32-gcc-libs-14.2.1+r32+geccf707e5ce-1  lib32-glib2-2.80.5-1
               lib32-glibc-2.40+r16+gaa533d58ff-2  lib32-libnghttp2-1.63.0-1  lib32-libnghttp3-1.5.0-1
               lib32-libnm-1.48.10-1  lib32-libpipewire-1:1.2.3-1  lib32-libtirpc-1.3.5-1
               lib32-libx11-1.8.10-1  lib32-libxtst-1.2.5-1  lib32-mesa-1:24.2.1-1  lib32-nss-3.103-1
               lib32-pipewire-1:1.2.3-1  lib32-pipewire-jack-1:1.2.3-1  lib32-sdl2-2.30.6-1
               lib32-sqlite-3.46.1-1  lib32-systemd-256.5-1  lib32-vulkan-mesa-layers-1:24.2.1-1
               lib32-vulkan-radeon-1:24.2.1-1  lib32-wayland-1.23.0-1  libadwaita-1:1.5.3-1  libbluray-1.3.4-2
               libcamera-0.3.1-2  libcamera-ipa-0.3.1-2  libdatachannel-0.21.2-2  libdeflate-1.21-1
               libdovi-3.3.1-1  libdrm-2.4.123-1  libei-1.3.0-1  libimagequant-4.3.3-1
               libimobiledevice-1.3.0-14  libinput-1.26.2-1  libjuice-1.5.2-1  libkexiv2-24.08.0-1
               libkscreen-6.1.4-1  libksysguard-6.1.4-1  libnghttp2-1.63.0-1  libnghttp3-1.5.0-1
               libnm-1.48.10-1  libnvme-1.10-1  libpcap-1.10.4-2  libpipeline-1.5.8-1  libpipewire-1:1.2.3-1
               libplasma-6.1.4-1  librsvg-2:2.58.3-1  libsasl-2.1.28-5  libsoup3-3.6.0-1  libssh-0.11.1-1
               libtiff-4.6.0-6  libtirpc-1.3.5-1  libtool-2.5.2+r1+g2fe3a3e2-1  libva-mesa-driver-1:24.2.1-1
               libwbclient-4.20.4-1  libwebp-1.4.0-2  libx11-1.8.10-1  libxfont2-2.0.7-1  libxtst-1.2.5-1
               lmdb-0.9.33-1  man-db-2.13.0-1  media-player-info-26-1  mesa-1:24.2.1-1  milou-6.1.4-1
               mpg123-1.32.7-1  nss-3.103-1  ocean-sound-theme-6.1.4-1  pam-1.6.1-3  pambase-20230918-2
               pciutils-3.13.0-2  pipewire-1:1.2.3-1  pipewire-alsa-1:1.2.3-1  pipewire-audio-1:1.2.3-1
               pipewire-jack-1:1.2.3-1  pipewire-pulse-1:1.2.3-1  plasma-activities-6.1.4-1
               plasma-activities-stats-6.1.4-1  plasma-integration-6.1.4-1  plasma-workspace-6.1.4-1
               plasma5support-6.1.4-1  polkit-125-1  prison-6.5.0-1  python-3.12.5-1
               python-certifi-2024.08.30-1  python-contourpy-1.3.0-1  python-coverage-7.6.1-1
               python-jaraco.functools-4.0.2-1  python-jaraco.text-4.0.0-1  python-lxml-5.3.0-1
               python-matplotlib-3.9.2-1  python-soupsieve-2.6-1  python-tqdm-4.66.5-1
               python-validate-pyproject-0.19-1  python-wheel-0.44.0-1  python-yaml-6.0.2-1
               qqc2-breeze-style-6.1.4-1  qqc2-desktop-style-6.5.0-1  qt6-base-6.7.2-2  readline-8.2.013-1
               sdl2-2.30.6-1  smbclient-4.20.4-1  solid-6.5.0-1  sonnet-6.5.0-1  sqlite-3.46.1-1
               steam-1.0.0.81-2  syndication-6.5.0-1  syntax-highlighting-6.5.0-1  systemd-256.5-1
               systemd-libs-256.5-1  systemd-sysvcompat-256.5-1  taglib-2.0.2-1  tdb-1.4.12-1  upower-1.90.5-2
               v4l-utils-1.28.1-1  vim-9.1.0697-1  vim-runtime-9.1.0697-1  vlc-3.0.21-2  vte-common-0.76.4-1
               vulkan-intel-1:24.2.1-1  vulkan-mesa-layers-1:24.2.1-1  vulkan-radeon-1:24.2.1-1
               webkit2gtk-4.1-2.44.3-3  wine-9.16-1  xdg-dbus-proxy-0.1.6-1  xdg-desktop-portal-kde-6.1.4-1
               xorg-xwayland-24.1.2-1

Total Download Size:      0.04 MiB
Total Installed Size:  3001.18 MiB
Net Upgrade Size:        55.00 MiB

:: Proceed with installation? [Y/n]
:: Retrieving packages...
 python-jaraco.text-4.0.0-1-any downloading...
 python-jaraco.functools-4.0.2-1-any downloading...
checking keyring...
checking package integrity...
error: python-jaraco.functools: signature from "Chih-Hsuan Yen <yan12125@archlinux.org>" is unknown trust
:: File /var/cache/pacman/pkg/python-jaraco.functools-4.0.2-1-any.pkg.tar.zst is corrupted (invalid or corrupted package (PGP signature)).
Do you want to delete it? [Y/n]
error: python-jaraco.text: signature from "Chih-Hsuan Yen <yan12125@archlinux.org>" is unknown trust
:: File /var/cache/pacman/pkg/python-jaraco.text-4.0.0-1-any.pkg.tar.zst is corrupted (invalid or corrupted package (PGP signature)).
Do you want to delete it? [Y/n]
error: failed to commit transaction (invalid or corrupted package)
Errors occurred, no packages were upgraded.
Error: An error occurred

── 14:37:50 - Firmware upgrades ────────────────────────────────────────────────
Metadata is up to date; use --force to refresh again.
Devices with no available firmware updates:
 • Intel Management Engine
 • UEFI Device Firmware
 • UEFI Device Firmware
 • UEFI Device Firmware
 • Wodposit NVMe SSD
No updatable devices

── 14:37:51 - Flatpak User Packages ────────────────────────────────────────────
Looking for updates…

Info: runtime org.kde.Platform branch 5.15-22.08 is end-of-life, with reason:
   We strongly recommend moving to the latest Qt 5.15-based stable version of the Platform and SDK
Info: applications using this runtime:
   org.openmw.OpenMW

Nothing to do.

── 14:37:52 - Flatpak System Packages ──────────────────────────────────────────
Looking for updates…

Nothing to do.

── 14:37:52 - Brew ─────────────────────────────────────────────────────────────
==> Updating Homebrew...
Already up-to-date.

── 14:37:59 - pip3 ─────────────────────────────────────────────────────────────
Requirement already satisfied: pip in /home/yan/.local/lib/python3.12/site-packages (24.2)

── 14:38:00 - Linux AMDGPU Control Application ─────────────────────────────────
Looking for updates...
LACT not installed, skipping.

── 14:38:01 - Mozilla GNOME Themes ─────────────────────────────────────────────
Looking for updates...

── 14:38:01 - Third Party CSS Loader Themes ────────────────────────────────────
Looking for updates...

── 14:38:01 - Summary ──────────────────────────────────────────────────────────
System update: OK
distrobox: IGNORED
Firmware upgrades: OK
Flatpak: OK
Brew: OK
pip3: OK
Linux AMDGPU Control Application: OK
Mozilla GNOME Themes: OK
Third Party CSS Loader Themes: OK

(R)eboot
(S)hell
(Q)uit
rpm-ostree status output 
yan@bazzite:~$ rpm-ostree status
State: idle
Deployments:
● ostree-image-signed:docker://ghcr.io/ublue-os/bazzite:stable
                   Digest: sha256:3061ddde849873e0dc540147c0a7c6d4cb2afd761c7ce72e14507fa8c12878b2
                  Version: 40.20240828.0 (2024-08-29T00:17:14Z)

  ostree-image-signed:docker://ghcr.io/ublue-os/bazzite:stable
                   Digest: sha256:3061ddde849873e0dc540147c0a7c6d4cb2afd761c7ce72e14507fa8c12878b2
                  Version: 40.20240828.0 (2024-08-29T00:17:14Z)
          LayeredPackages: libmediainfo

I have already removed the two layered packages I had, which were both very small. I did this using rpm-ostree reset. Any help would at this stage would be most welcome.

2

That’s not your system it looks like it’s wedged trying to update your arch distrobox.

3

Yeah one of your Distrobox containers probably have to be remade. No big deal.

4

I’ve had trouble updating an Ubuntu 22.04 container in Ptyxis before. What worked for me was to simply update the Ubuntu container from within Ubuntu’s terminal. Afterwards, the system would update normally including Ubuntu.

5

Thank you, I forgot I had created this. I now understand what the summary means - ujust is updating all of them individually and only Distrobox was yellow instead of green for OK.

1 Like
6

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