While using topgrade, I got the following error while progress was running:
[3/4] Upgrading mesa-vulkan-drivers-0:24.3.4-3.fc41.x86_64 100% | 335.1 MiB/s | 105.2 MiB | 00m00s
[RPM] unpacking of archive failed on file /usr/share/vulkan/icd.d/broadcom_icd.x86_64.json;679dcae4: cpio:
Unpack error: mesa-vulkan-drivers-0:24.3.4-3.fc41.x86_64
This was the full terminal output after topgrade:
── 09:18:27 - System update ────────────────────────────────────────────────────
Note: This system is image (rpm-ostree) based.
Pulling manifest: ostree-image-signed:docker://ghcr.io/ublue-os/bazzite-nvidia:stable
Checking out tree 072dabd… done
Enabled rpm-md repositories: copr:copr.fedorainfracloud.org:ilyaz:LACT copr:copr.fedorainfracloud.org:rodoma92:kde-cdemu-manager copr:copr.fedorainfracloud.org:rodoma92:rmlint copr:copr.fedorainfracloud.org:rok:cdemu updates fedora copr:copr.fedorainfracloud.org:codifryed:CoolerControl updates-archive
Importing rpm-md… done
rpm-md repo ‘copr:copr.fedorainfracloud.org:ilyaz:LACT’ (cached); generated: 2025-01-16T07:49:04Z solvables: 12
rpm-md repo ‘copr:copr.fedorainfracloud.org:rodoma92:kde-cdemu-manager’ (cached); generated: 2024-10-29T12:13:12Z solvables: 16
rpm-md repo ‘copr:copr.fedorainfracloud.org:rodoma92:rmlint’ (cached); generated: 2024-10-29T12:31:09Z solvables: 4
rpm-md repo ‘copr:copr.fedorainfracloud.org:rok:cdemu’ (cached); generated: 2024-10-21T13:15:21Z solvables: 23
rpm-md repo ‘updates’ (cached); generated: 2025-02-01T05:26:14Z solvables: 19132
rpm-md repo ‘fedora’ (cached); generated: 2024-10-24T13:55:59Z solvables: 76624
rpm-md repo ‘copr:copr.fedorainfracloud.org:codifryed:CoolerControl’ (cached); generated: 2024-12-15T04:11:31Z solvables: 6
rpm-md repo ‘updates-archive’ (cached); generated: 2025-02-01T06:02:46Z solvables: 27453
Resolving dependencies… done
No upgrade available.
── 09:18:49 - Distrobox ────────────────────────────────────────────────────────
Upgrading fedora…
Starting container… [ OK ]
Installing basic packages… [ OK ]
Setting up devpts mounts… [ OK ]
Setting up read-only mounts… [ OK ]
Setting up read-write mounts… [ OK ]
Setting up host’s sockets integration… [ OK ]
Setting up host’s nvidia integration… [ OK ]
Integrating host’s themes, icons, fonts… [ OK ]
Setting up distrobox profile… [ OK ]
Setting up sudo… [ OK ]
Setting up user’s group list… [ OK ]
Container Setup Complete!
distrobox: Installing basic packages…
/usr/bin/dnf
Updating and loading repositories:
Repositories loaded.
Package Arch Version Repository Size
Upgrading:
mesa-vulkan-drivers x86_64 24.3.4-3.fc41 updates 105.2 MiB
replacing mesa-vulkan-drivers x86_64 24.3.3-2.fc41 7e5c8250c1944e36a2f10b854f0 104.2 MiB
Transaction Summary:
Upgrading: 1 package
Replacing: 1 package
Total size of inbound packages is 19 MiB. Need to download 0 B.
After this operation, 997 KiB extra will be used (install 105 MiB, remove 104 MiB).
[1/1] mesa-vulkan-drivers-0:24.3.4-3.fc41.x86_64 100% | 0.0 B/s | 0.0 B | 00m00s
Already downloaded
[1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s
Running transaction
[1/4] Verify package files 100% | 21.0 B/s | 1.0 B | 00m00s
[2/4] Prepare transaction 100% | 42.0 B/s | 2.0 B | 00m00s
[3/4] Upgrading mesa-vulkan-drivers-0:24.3.4-3.fc41.x86_64 100% | 335.1 MiB/s | 105.2 MiB | 00m00s
[RPM] unpacking of archive failed on file /usr/share/vulkan/icd.d/broadcom_icd.x86_64.json;679dcae4: cpio:
Unpack error: mesa-vulkan-drivers-0:24.3.4-3.fc41.x86_64
Transaction failed: Rpm transaction failed.
Error: An error occurred
── 09:19:02 - Firmware upgrades ────────────────────────────────────────────────
Updating lvfs
Downloading… [ - ]
Successfully downloaded new metadata: 1 local device supported
Devices with no available firmware updates:
• AFOX SSD 480GB
• HS-SSD-Desire(P) 512G
• SP900
• ST500LT012-1DG142
• System Firmware
• TS128GSSD340
Devices with the latest available firmware version:
• UEFI dbx
No updates available
── 09:19:02 - Flatpak User Packages ────────────────────────────────────────────
Looking for updates…
Nothing to do.
── 09:19:02 - Flatpak System Packages ──────────────────────────────────────────
Looking for updates…
Nothing to do.
── 09:19:03 - pip3 ─────────────────────────────────────────────────────────────
Requirement already satisfied: pip in /home/Chronoflare/.local/lib/python3.13/site-packages (25.0)
── 09:19:04 - Mozilla GNOME Themes ─────────────────────────────────────────────
Looking for updates…
── 09:19:04 - Third Party CSS Loader Themes ────────────────────────────────────
Looking for updates…
── 09:19:04 - Summary ──────────────────────────────────────────────────────────
System update: OK
distrobox: IGNORED
Firmware upgrades: OK
Flatpak: OK
pip3: OK
Mozilla GNOME Themes: OK
Third Party CSS Loader Themes: OK
en-ZA.
(R)eboot
(S)hell
(Q)uit
So thinking that clearing the cached packaged might help I used: rpm-ostree cleanup -m and then retried running topgrade.
This caused the system to get stuck on updating metadata for fedora at 95% with 0sec remaining, I fear the system is unstable so I refuse to shutdown at this point, can anyone help?